Ordering Recommendation

Preferred test to assess for copy number variants and absence of heterozygosity in critically ill newborn patients (<3 months old). 

New York DOH Approval Status

This test is not New York state approved.

Specimen Required

Patient Preparation

IF Buccal swab: Patient should not eat, drink, smoke or chew gum for 30 minutes before collecting oral sample.

Collect

Peripheral blood or cord blood collected in lavender (K2EDTA).
OR Buccal swab: collect one buccal swab using the ORAcollect Collection Kit (ARUP supply #49295). Available online through eSupply using ARUP Connect or contact ARUP Client Services at 800-522-2787

Specimen Preparation

Whole Blood: Transport 3 mL. (Min: 0.5 mL)
Buccal Swab: ensure the sponge tip does not come in contact with any surface prior to collection. Transport buccal swab in ORAcollect Collection Kit.

Storage/Transport Temperature

Preferred transport temp: Room temperature.

Unacceptable Conditions

Frozen or clotted specimens

Remarks
Stability

Whole blood: Room temperature: 2 days; Refrigerated: 3 days; Frozen: Unacceptable
Buccal swab: Room temperature: 1 week; Refrigerated: 1 week; Frozen: Unacceptable

Methodology

Genomic Microarray (Oligo-SNP Array)

Performed

Sun-Sat

Reported

5-7 days

Reference Interval

Interpretive Data

Refer to report.

Compliance Category

Laboratory Developed Test (LDT)

Note

Hotline History

N/A

CPT Codes

81229

Components

Component Test Code* Component Chart Name LOINC
3016597 Cytogenomic SNP Microarray 62375-1
* Component test codes cannot be used to order tests. The information provided here is not sufficient for interface builds; for a complete test mix, please click the sidebar link to access the Interface Map.

Aliases

  • aCGH
  • Array CGH
  • Array Comparative Genomic Hybridization
  • CGH
  • Chromosomal Microarray
  • CMA
  • Comparative Genomic Hybridization
  • Congenital Array
  • Constitutional Array
  • Genomic Microarray
  • Microarray
  • Molecular Karyotype
  • Oligo Array
  • Oligonucleotide Array
  • Single-nucleotide-polymorphism (SNP) array
  • Targeted Array
  • Whole Genome Array
Cytogenomic SNP Microarray - RAPID