Familial Mutation, Targeted Sequencing (Inactive as of 11/14/2022)

2001961
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Familial Variant Testing Patient History Form

Ordering Recommendation

Recommended test for a known familial sequence variant previously identified in a family member. A copy of the family member’s test result documenting the familial variant is required. Consultation with a genetic counselor is advised. Sequencing is currently limited to the following genes: HBB, HBA1, HBA2, HBG1, HBG2, and GBA.

Mnemonic

SEQ FSM

Methodology

Polymerase Chain Reaction/Sequencing

Performed

Sun- Sat

Reported

21-28 days

New York DOH Approval Status

Specimens from New York clients will be sent out to a New York DOH approved laboratory, if possible.

Specimen Required

Patient Preparation
Collect

Contact ARUP's genetic counselor at (800) 242-2787 extension 2141 prior to test submission for specimen requirements and submission information.

Specimen Preparation
Storage/Transport Temperature
Unacceptable Conditions
Remarks

Documentation of the familial gene variants(s) is required to perform targeted sequencing. Submit a copy of a relative's laboratory test report documenting the gene and specific variants(s) for which testing is requested.
Submit a positive control with the patient specimen for appropriate interpretation, order Sequencing Control (test code 0051650). Samples tested without a familial positive control may be subject to a disclaimer.
Testing will begin upon receipt of all necessary components, including an original laboratory report detailing the familial variant(s) to be tested and a familial positive control sample.

Stability

Reference Interval

By report

Interpretive Data

By report

This test was developed and its performance characteristics determined by ARUP Laboratories. It has not been cleared or approved by the US Food and Drug Administration. This test was performed in a CLIA certified laboratory and is intended for clinical purposes.

Counseling and informed consent are recommended for genetic testing. Consent forms are available online.

Compliance Category

Laboratory Developed Test (LDT)

Note

Genes currently limited to: HBB, HBA1, HBA2, HBG1, HBG2, GBA.

Hotline History

View Hotline History

 

Hotline History

Date of Change
Test Name Change
Methodology
Performance/Reported Schedule
Specimen Requirements
Reference Interval
Interpretive Data
Note
CPT Code
Component Change
Other Interface Change
New Test
Inactive
09/07/2021
X
X
X
X
N/A

CPT Codes

Varies by gene

Are you an ARUP Client? Click here for your pricing.

Components

Component Test Code* Component Chart Name LOINC
2001962 SEQ FSM Specimen 31208-2
2001963 Targeted Sequencing Gene 48018-6
2001965 Targeted Sequencing Interpretation 50398-7
* Component test codes cannot be used to order tests. The information provided here is not sufficient for interface builds; for a complete test mix, please click the sidebar link to access the Interface Map.

Aliases

  • Sequencing for familial mutation
  • site-specific analysis, familial variant test, known familial variant/mutation, variant-specific DNA
Familial Mutation, Targeted Sequencing (Inactive as of 11/14/2022)